HPLC Syringe Filter Membrane Comparison & Selection Guide
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HPLC Organic-Phase Sample Syringe Filter Membrane Comparison & Selection Guide

Jul. 31st, 2025
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In HPLC sample preparation, syringe filters play a critical role. Particulates in samples can clog columns, shorten column life, destabilize detector signals, and compromise reproducibility. Pre-filtration removes these impurities, improving repeatability and baseline stability. Needle-style syringe filters provide a convenient single-use solution, ensuring samples are clean before injection, protecting both the column and the instrument, and enhancing analytical reliability


Key Characteristics of Different Filter Membrane Materials


PTFE (Polytetrafluoroethylene) Membranes

Chemical Compatibility: Exceptionally inert and resistant to nearly all organic solvents, acids, and bases, but hydrophobic—unsuitable for direct aqueous filtration. Ideal for high-polarity solvents (e.g., acetonitrile, DMSO), high-temperature, and corrosive environments. Releases virtually no extractables.
Flow Rate: Dense structure requires pre-wetting with organic solvent, resulting in relatively low flow rates.
Protein Binding: Hydrophobic surface yields minimal non-specific protein adsorption, making it ideal for trace-level analyses. Use Cases & Limitations: Best for harsh or highly polar organic samples (acid digests, reagent extracts). Not for water without pre-wetting; avoid membrane drying to prevent tears.

Nylon Membranes
Chemical Compatibility: Hydrophilic; compatible with water and most organic solvents. Common solvents like acetonitrile and DMSO are fully supported, while THF and high-concentration methanol are subject to caution. Stability declines in strong acids/bases. Flow Rate: Moderate—wets quickly and filters faster than PTFE, but generally slower than PVDF. Protein Binding: High non-specific adsorption—unsuitable for protein-rich samples requiring maximum recovery. Use Cases & Limitations: Versatile for routine organic solvent or buffered aqueous samples (e.g., acetonitrile, methanol). Rugged and autoclavable, but avoid protein or strong-acid/base samples.

PVDF (Polyvinylidene Fluoride) Membranes
Chemical Compatibility: Hydrophilic; stable with water, alcohols, and ketones under neutral to mildly acidic/basic conditions. Very low UV absorbance minimizes background interference. Flow Rate: High—wets easily, offering faster filtration than PTFE at the same pore size
Protein Binding: Low—excellent for biological samples, proteins, and cell culture media.
Use Cases & Limitations: Ideal for protein/peptide or alcohol-based sample filtration. Sensitive to strong bases, which can degrade the membrane.

PC (Polycarbonate) Membranes
Chemical Compatibility: Smooth, robust surface compatible with many acids, salts, oils, and saturated hydrocarbons. Not resistant to methanol, ketones, ethers, or aromatics. Flow Rate: Very high—uniform pore distribution yields low backpressure and rapid flow. Protein Binding: Extremely low—glass-like surface prevents adsorption of proteins and large molecules.

Use Cases & Limitations: Suited for particle counting, microscopic particle analysis, and cell studies requiring absolute retention. Rarely used in routine organic HPLC due to solvent limitations.

Performance Comparison

Membrane

Chemical Compatibility

Flow Rate

Protein Binding

Applications & Limits

PTFE

Resistant to nearly all corrosive solvents; hydrophobic

Low

Very low

Harsh organic phases; not for aqueous without pre-wet

Nylon

Hydrophilic; good with ACN, DMSO; caution with THF, MeOH

Moderate

High

Routine organics/buffers; avoid proteins & strong acids

PVDF

Hydrophilic; stable with water, alcohols, ketones

High

Low

Biological/alcohol samples; avoid strong bases

PC

Smooth; good with acids, salts, oils; not for MeOH, ketones

Very high

Very low

Particle/microscopy; not routine organic HPLC


Selecting the Right Membrane for Your Sample


Harsh or High-Polarity Solvents + Trace Analysis: Use PTFE for its unrivaled chemical resistance and low extractables.

Biological Samples (Proteins) + Alcohol/Water: Use PVDF for minimal protein binding and broad solvent compatibility.
Routine Organic Solvents: Use Nylon for its general compatibility and durability—avoid protein or extreme pH.
Particle Counting/Microscopy: Use PC for precise pore size and negligible adsorption.

Note: Always consider sample chemistry, cost, and instrument requirements when making your final selection.

 


 

Aijiren offers a full range of high-quality syringe filters with PTFE, Nylon, PVDF, and PC membranes to meet all your HPLC organic-phase filtration needs. Contact us for samples or technical consultation, and let us help you choose the optimal filter solution.

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